Publications

 

You can also see my publications in PubMed or in my Google Scholar profile. My ORCID iD is 0000-0001-7622-5482.

Refereed Journal Publications

[10] *Aguilar-Rodríguez, J.*Payne, J. L., Wagner, A. (2017). A thousand empirical adaptive landscapes and their navigability. Nature Ecology & Evolution, 1: 0045.

• SIB Best Swiss Bioinformatics Graduate Paper Award. [link]

[9] Blattner, A. C., Aguilar-Rodríguez, J., Kränzlin, M., Wagner, A., Lehner, C. F. (2017). Drosophila Nnf1 paralogs are partially redundant for somatic and germ line kinetochore function. Chromosoma, 126(1): 145–163.

[8] *Aguilar-Rodríguez, J.*Sabater-Muñoz, B, Montagud-Martínez, R., Berlanga, V.,   Alvarez-Ponce, D., Wagner, A., Fares, M. A. (2016). The molecular chaperone DnaK is a source of mutational robustness. Genome Biology and Evolution, 8(9): 2979–2991.

• Research highlight in Genome Biology and Evolution. [link]

[7] Khalid, F., Aguilar-Rodríguez, J., Wagner, A., Payne, J. L. (2016). Genonets Server–a web server for the construction, analysis and visualization of genotype networks. Nucleic Acids Research, 44: W70-76.

• Video tip of the week, OpenHelix, June 22, 2016. [link]

[6] Sprouffske, K., Aguilar-Rodríguez, J., Wagner, A. (2016). How archiving by freezing affects the genome-scale diversity of Escherichia coli populations. Genome Biology and Evolution, 8(5): 1290-1298.

[5] SIB Swiss Institute of Bioinformatics Members (including José Aguilar-Rodríguez) (2016). The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases. Nucleic Acids Research, 44: D27-37.

[4] *Sabater-Muñoz, B., *Prats-Escriche, M., Montagud-Martínez, R., López-Cerdán, A., Toft, C., Aguilar-Rodríguez, J., Wagner, A., Fares, M. A. (2015). Fitness trade-offs determine the role of the molecular chaperonin GroEL in buffering mutations. Molecular Biology and Evolution, 32(10): 2681-2693.

[3] Ashikaga, H., Aguilar-Rodríguez, J., Gorsky, S., Lusczek, E., Marquitti, F. M. D., Thompson, B., Wu, D., Garland, J. (2015). Modelling the heart as a communication system. Journal of the Royal Society Interface, 12: 20141201.

• John Hopkins Medicine News, March 10, 2015. [link]

[2] Llorens, C., Futami, R., Covelli, L., Domínguez-Escribá, L., Viu, J. M., Tamarit, D., Aguilar-Rodríguez, J., Vicente-Ripolles, V., Fuster, G., Bernet, G. P., Maumus, F., Munoz-Pomer, A., Sempere, J. M., Latorre, A., Moya, A. (2011). The Gypsy Database (GyDB) of mobile genetic elements: release 2.0. Nucleic Acids Research, 39: D70-74.

[1] The International Aphid Genomics Consortium (including José Aguilar) (2010). Genome sequence of the pea aphid Acyrthosiphon pisum. PLoS Biology, 8: e1000313.

Other Publications

[2] Baquero, F., Aguilar-Rodríguez, J., Moya., A. (2011). La biología como forma de representación: Wittgenstein y la partitura de la vida. Ludus Vitalis: Journal of Philosophy of Life Sciences, 19: 29-46. [In Spanish]

[1] Aguilar Rodríguez, J. (2011). Explorant l’emergència de les primeres cèl·lules [Book Review of First Life: Discovering the Connections between Stars, Cells and How Life Began, by David Deamer, Princeton University Press, 2011]. Mètode: Journal of Public Understanding of Science, 72. [In Catalan]

*denotes equal contribution
denotes co-corresponding authors

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